Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813100.1_cds_XP_016497417.1_11543
CDS Infomation

[gene=LOC107816231] [db_xref=GeneID:107816231] [protein=ubiquitin-like-specific protease ESD4 isoform X2] [protein_id=XP_016497417.1] [location=join(3659..4120,4235..4519,4794..4876,4970..5063,5159..5257,6499..6591,6670..6789,7848..7951,13133..13214)] [gbkey=CDS]
Sequence

ATGGGGGCTTTAACGAGTTATCGAAAACGGGGTGACGATTTTTTCACCTTGAATTACAAA
ACTCCAGTTTCAAACGTTGACCCTCACATTTCCAAAAAACCCAGGCTTTCTATGAACCAA
ACAACACAAGATCACAGCAAAACATCAACAGTCACAAGGCTTTTCACCAAATACCCATCT
TCCATCACTCCCATTAAAAGAGAAATTCATGCTCCTTGTAGAAGACCATCTTCTTCGAGA
TTTGGAGGTGGGTCCCACTCAATAATGGGGAATTTCCTAGTTCGGCAGTTATATAGAGCT
AAAAGAAGCGCTTTTAAAACCTTCAGGTACGTGAAGAAAAAAGATAAAGAAGTGGTCATA
AACATTGATGATGATGATGATGGGGATTCGAATGTTGAGGAATTGGGAACTGGGGTTGTT
CCAAAAACGGGTCTTTTTGACGGGTCGGGTCAGAGACGGAAGCTTCAGAGTTCTTCAGTT
GTAACAGTGTCCGATGACGATGTGAATTTGTTGAAGGTGGAGAATGCAGAAAAGATGATG
GATTCGTTATCTTTGAGTAGTAGCAAGTTTGATGATTCATCTTCATCAGCATCCTTTGTT
CCTTCGTATAAGAAATTGTTGGATTCAGCTGAGAAAAGAAATAATAGTTTAAAGAGCCTG
CAGTTTCACATTGAGTATACTGAGAAAATTCTTGAAACATATAAGTTGTTGAGGCCTCAA
AAGAAAGATGAACAATATGTTAAGGAGGATGTGATTACAGAACCCTTTGTGCAAATTGAT
AAGGAGGAAGAGGCTGAAGTTTCTCATGCTTTATCTAATTATAGCAGCAGGAGGAAGGTT
TTGGTAACCCATGAAAACTCCAATATAGATATTACTGGAGAGATATTGCAGTGTTTGAGA
CCTGGGGCATGGTTGAATGATGAGGTGATTAATGTGTATCTTGAGTTGTTAAAAGAGAGA
GAGAAAAGGGAGCCCCAAAAGTTCTTGAGATGTCATTTCTTTAACACATTCTTTTACAAG
AAGTTAATCAGTGGCAAGGGAGGCTATAACTATCAATCTGTGAAAAGATGGACATCCCAA
AGGAAGCTGGGGTACAGCCTCTTTGAATGTGATAAAATTTTTGTTCCTATCCACCAAGAA
GTACATTGGTGTTTAGCTGTCATCAACAAGAAGGATGAAAAGTTCCAGTATCTTGATTCA
CTTGGAGGAAGAGATAATCAAGTACTGAGAGTGCTGACTAGGTACTTTATTGACGAGGTG
AAGGACAAGAATGGGAAAGATATTGATGTTAGCTCGTGGAAGCAAGAATTTGTTGAGGAC
CTCCCAGAGCAAGAGAATTGGTTTGATTGTGGTATGTTCATGATCAAATATGCTGATTTC
TACAGCAGAGATATAGGACTCCGTTTTAGTCAGGTAAACTGA

Peptide Sequence

PEP ID

XP_016497417.1
PEP Infomation

PREDICTED: ubiquitin-like-specific protease ESD4 isoform X2 [Nicotiana tabacum]
Sequence

MGALTSYRKRGDDFFTLNYKTPVSNVDPHISKKPRLSMNQTTQDHSKTSTVTRLFTKYPS
SITPIKREIHAPCRRPSSSRFGGGSHSIMGNFLVRQLYRAKRSAFKTFRYVKKKDKEVVI
NIDDDDDGDSNVEELGTGVVPKTGLFDGSGQRRKLQSSSVVTVSDDDVNLLKVENAEKMM
DSLSLSSSKFDDSSSSASFVPSYKKLLDSAEKRNNSLKSLQFHIEYTEKILETYKLLRPQ
KKDEQYVKEDVITEPFVQIDKEEEAEVSHALSNYSSRRKVLVTHENSNIDITGEILQCLR
PGAWLNDEVINVYLELLKEREKREPQKFLRCHFFNTFFYKKLISGKGGYNYQSVKRWTSQ
RKLGYSLFECDKIFVPIHQEVHWCLAVINKKDEKFQYLDSLGGRDNQVLRVLTRYFIDEV
KDKNGKDIDVSSWKQEFVEDLPEQENWFDCGMFMIKYADFYSRDIGLRFSQVN

Transcript Sequence

Gene sequence data has not been registered.